Package: abyss (2.3.5+dfsg-2) [debports]

[ Source:  ]

de novo, parallel, sequence assembler for short reads

ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.

Other Packages Related to abyss

• dep: bsdextrautils

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• dep: libc6.1 (>= 2.35)

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  also a virtual package provided by libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libopenmpi3 (>= 4.1.4)

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• dep: libsqlite3-0 (>= 3.5.9)

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• dep: libstdc++6 (>= 12)

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• dep: libunwind8

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• dep: make

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• dep: openmpi-bin

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• dep: openmpi-common

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• dep: perl

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Download abyss

Download for all available architectures

Architecture	Package Size	Installed Size	Files
ia64 (unofficial port)	3,493.2 kB	17,029.0 kB	[list of files]