Package: fastlink (4.1P-fix100+dfsg-5)

Links for fastlink

Debian Resources:

Download Source Package fastlink:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Andreas Tille (QA Page)
Charles Plessy (QA Page)

External Resources:

Homepage [www.ncbi.nlm.nih.gov]

Similar packages:

faster version of pedigree programs of Linkage

Genetic linkage analysis is a statistical technique used to map genes and find the approximate location of disease genes. There was a standard software package for genetic linkage called LINKAGE. FASTLINK is a significantly modified and improved version of the main programs of LINKAGE that runs much faster sequentially, can run in parallel, allows the user to recover gracefully from a computer crash, and provides abundant new documentation. FASTLINK has been used in over 1000 published genetic linkage studies.

This package contains the following programs:

 ilink:    GEMINI optimization procedure to find a locally
           optimal value of the theta vector of recombination
           fractions
 linkmap:  calculates location scores of one locus against a
           fixed map of other loci
 lodscore: compares likelihoods at locally optimal theta
 mlink:    calculates lod scores and risk with two of more loci
 unknown:  identify possible genotypes for unknowns

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Need an extra tag, Works with: Need an extra tag

Other Packages Related to fastlink

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Library: Shared libraries
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]

sug: fastlink-doc

Some papers about fastlink

Download fastlink

Download for all available architectures
Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	234.0 kB	1,035.0 kB	[list of files]
amd64	250.3 kB	859.0 kB	[list of files]
arm64	235.0 kB	1,035.0 kB	[list of files]
armel	238.8 kB	922.0 kB	[list of files]
armhf	226.2 kB	662.0 kB	[list of files]
hppa (unofficial port)	223.4 kB	795.0 kB	[list of files]
i386	248.1 kB	902.0 kB	[list of files]
ia64 (unofficial port)	287.9 kB	1,614.0 kB	[list of files]
m68k (unofficial port)	228.6 kB	822.0 kB	[list of files]
mips64el	237.9 kB	1,067.0 kB	[list of files]
ppc64 (unofficial port)	253.3 kB	1,227.0 kB	[list of files]
ppc64el	253.7 kB	1,099.0 kB	[list of files]
riscv64	267.5 kB	795.0 kB	[list of files]
s390x	281.7 kB	1,083.0 kB	[list of files]
sh4 (unofficial port)	265.1 kB	1,034.0 kB	[list of files]
sparc64 (unofficial port)	229.6 kB	5,264.0 kB	[list of files]
x32 (unofficial port)	245.4 kB	806.0 kB	[list of files]