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[ Source: fastdnaml  ]

Package: fastdnaml (1.2.2-9 and others)

Tool for construction of phylogenetic trees of DNA sequences

fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML (part of his PHYLIP package). Users should consult the documentation for DNAML before using this program.

fastDNAml is an attempt to solve the same problem as DNAML, but to do so faster and using less memory, so that larger trees and/or more bootstrap replicates become tractable. Much of fastDNAml is merely a recoding of the PHYLIP 3.3 DNAML program from PASCAL to C.

Note that the homepage of this program is not available any more and so this program will probably not see any further updates.

Tags: Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Analysing, Comparing, Supports Format: Plain Text

Other Packages Related to fastdnaml

  • depends
  • recommends
  • suggests
  • dep: libc0.1 (>= 2.3) [kfreebsd-amd64, kfreebsd-i386]
    GNU C Library: Shared libraries
    also a virtual package provided by libc0.1-udeb
  • dep: libc0.3 (>= 2.9) [hurd-i386]
    GNU C Library: Shared libraries
    also a virtual package provided by libc0.3-udeb
  • dep: libc6 (>= 2.1) [i386]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.2) [hppa, mips, mipsel]
    dep: libc6 (>= 2.2.5) [amd64]
    dep: libc6 (>= 2.4) [armel, powerpc, s390]
    dep: libc6 (>= 2.5) [avr32]
    dep: libc6 (>= 2.5-5) [m68k]
    dep: libc6 (>= 2.6) [sparc]
  • dep: libc6.1 (>= 2.2) [ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
    dep: libc6.1 (>= 2.4) [alpha]
  • sug: phylip
    package of programs for inferring phylogenies

Download fastdnaml

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha 1.2.2-9 68.9 kB456 kB [list of files]
amd64 1.2.2-9 65.9 kB444 kB [list of files]
armel 1.2.2-9 65.8 kB444 kB [list of files]
avr32 (unofficial port) 1.2.2-9 66.7 kB432 kB [list of files]
hppa 1.2.2-9 65.9 kB440 kB [list of files]
hurd-i386 1.2.2-9 62.2 kB432 kB [list of files]
i386 1.2.2-9 62.1 kB432 kB [list of files]
ia64 1.2.2-9 82.4 kB508 kB [list of files]
kfreebsd-amd64 1.2.2-9 66.0 kB296 kB [list of files]
kfreebsd-i386 1.2.2-9 62.1 kB288 kB [list of files]
m68k (unofficial port) 1.2.2-8 60.1 kB440 kB [list of files]
mips 1.2.2-9 67.1 kB456 kB [list of files]
mipsel 1.2.2-9 67.2 kB456 kB [list of files]
powerpc 1.2.2-9 66.0 kB448 kB [list of files]
s390 1.2.2-9 64.9 kB440 kB [list of files]
sparc 1.2.2-9 62.0 kB440 kB [list of files]