Package: dialign-tx (1.0.2-15)

[ Source: dialign-t  ]

Segment-based multiple sequence alignment

DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to dialign-tx

• dep: dialign-tx-data (= 1.0.2-15)

  Segment-based multiple sequence alignment (data files)

• dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.37) [sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.37) [ia64]

• enh: t-coffee

  Multiple Sequence Alignment

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Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	104.2 kB	275.0 kB	[list of files]
amd64	85.5 kB	223.0 kB	[list of files]
arm64	89.3 kB	210.0 kB	[list of files]
armel	75.1 kB	198.0 kB	[list of files]
armhf	66.8 kB	142.0 kB	[list of files]
hppa (unofficial port)	95.7 kB	211.0 kB	[list of files]
i386	79.5 kB	210.0 kB	[list of files]
ia64 (unofficial port)	151.4 kB	447.0 kB	[list of files]
m68k (unofficial port)	66.0 kB	194.0 kB	[list of files]
mips64el	99.9 kB	278.0 kB	[list of files]
ppc64 (unofficial port)	93.3 kB	275.0 kB	[list of files]
ppc64el	93.0 kB	275.0 kB	[list of files]
riscv64	106.1 kB	187.0 kB	[list of files]
s390x	73.6 kB	202.0 kB	[list of files]
sh4 (unofficial port)	91.8 kB	210.0 kB	[list of files]
sparc64 (unofficial port)	84.4 kB	1,044.0 kB	[list of files]
x32 (unofficial port)	82.1 kB	206.0 kB	[list of files]