[  lenny  ] [  sid  ]
[ Source: autodocksuite  ]

Package: autodock (4.0.1-3)

analysis of ligand binding to protein structure

AutoDock is a prime representative of the programs addressing the simulation of the docking of fairly small chemical ligands to rather big protein receptors. Earlier versions had all flexibility in the ligands while the protein was kept rather ridgid. This latest version 4 also allows for a flexibility of selected sidechains of surface residues, i.e., takes the rotamers into account.

The AutoDock program performs the docking of the ligand to a set of grids describing the target protein. AutoGrid pre-calculates these grids.

Other Packages Related to autodock

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7-1)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:4.1.1-21)
    GCC support library
  • dep: libstdc++6 (>= 4.1.1-21)
    The GNU Standard C++ Library v3
  • rec: autogrid
    pre-calculate binding of ligands to their receptor

Download autodock

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 1,468.0 kB1820 kB [list of files]