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[ Source: tigr-glimmer  ]

Package: tigr-glimmer (2.13-1)

[Biology] Gene detection in archea and bacteria

Developed by the TIGR institute this software detects coding sequences in bacteria and archea.

Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria and archaea. Glimmer (Gene Locator and Interpolated Markov Modeler) uses interpolated Markov models (IMMs) to identify the coding regions and distinguish them from noncoding DNA. 

 Homepage: http://www.tigr.org/software/glimmer/

Other Packages Related to tigr-glimmer

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.2.ds1-4) [not alpha, ia64]
    GNU C Library: Shared libraries and Timezone data
    also a virtual package provided by libc6-udeb
  • dep: libc6.1 (>= 2.3.2.ds1-4) [alpha, ia64]
    GNU C Library: Shared libraries and Timezone data
    also a virtual package provided by libc6.1-udeb
  • dep: libgcc1 (>= 1:3.3.4-1) [hppa, m68k]
    GCC support library
    dep: libgcc1 (>= 1:3.4.1-3) [not hppa, m68k]
  • dep: libstdc++5 (>= 1:3.3.4-1)
    The GNU Standard C++ Library v3

Download tigr-glimmer

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 144.0 kB436 kB [list of files]
amd64 (unofficial port) 121.1 kB388 kB [list of files]
arm 106.2 kB332 kB [list of files]
hppa 132.3 kB384 kB [list of files]
i386 112.1 kB352 kB [list of files]
ia64 165.9 kB528 kB [list of files]
m68k 98.8 kB320 kB [list of files]
mips 156.7 kB508 kB [list of files]
mipsel 156.9 kB508 kB [list of files]
powerpc 124.5 kB364 kB [list of files]
s390 114.7 kB364 kB [list of files]
sparc 116.5 kB352 kB [list of files]