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[ Source: clustalw  ]

Package: clustalx (1.83-1) [non-free]

[Biology] GUI for clustalw

GUI interface for the ClustalW multiple sequence alignment program. It provides an integrated environment for performing multiple sequence and profile alignments and analysing the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated allowing you to highlight conserved features in the alignment. The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment.

You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

Alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted. 

 URL: ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/
 URL: ftp://ftp.ebi.ac.uk/pub/software/unix/clustalx/

Other Packages Related to clustalx

  • depends
  • recommends
  • suggests
  • dep: clustalw
    [Biology] Global multiple nucleotide or peptide sequence alignment
  • dep: lesstif1
    OSF/Motif 1.2 implementation released under LGPL
  • dep: libc6 (>= 2.3.1-1) [i386, m68k]
    GNU C Library: Shared libraries and Timezone data
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.2.ds1-4) [not alpha, i386, ia64, m68k]
  • dep: libc6.1 (>= 2.3.2.ds1-4) [alpha, ia64]
    GNU C Library: Shared libraries and Timezone data
    also a virtual package provided by libc6.1-udeb
  • dep: libncbi6 (>= 6.1.20030421) [m68k]
    NCBI libraries for biology applications
    dep: libncbi6 (>= 6.1.20040204) [powerpc]
    dep: libncbi6 (>= 6.1.20040505) [amd64]
    dep: libncbi6 (>= 6.1.20040616) [alpha, hppa, mips, sparc]
    dep: libncbi6 (>= 6.1.20041020) [arm, ia64, s390]
  • dep: libvibrant6 (>= 6.1.20030421) [m68k]
    NCBI libraries for graphic biology applications
    dep: libvibrant6 (>= 6.1.20040204) [powerpc]
    dep: libvibrant6 (>= 6.1.20040505) [amd64]
    dep: libvibrant6 (>= 6.1.20040616) [alpha, hppa, mips, sparc]
    dep: libvibrant6 (>= 6.1.20041020) [arm, ia64, s390]
  • dep: libx11-6 [not i386, m68k]
    X Window System protocol client library
    or xlibs (>> 4.1.0)
    X Keyboard Extension (XKB) configuration data and metapackage
  • dep: libxmu6 [not i386, m68k]
    X Window System miscellaneous utility library
    or xlibs (>> 4.1.0)
    X Keyboard Extension (XKB) configuration data and metapackage
  • dep: libxt6 [not i386, m68k]
    X Toolkit Intrinsics
    or xlibs (>> 4.1.0)
    X Keyboard Extension (XKB) configuration data and metapackage
  • dep: ncbi-tools6 (>= 6.1.20030421) [i386]
    NCBI libraries for biology applications (transitional package)
    also a virtual package provided by libncbi6
  • dep: vibrant6 (>= 6.1.20030421) [i386]
    NCBI libraries for graphic biology apps (transitional package)
    also a virtual package provided by libvibrant6
  • dep: xlibs (>> 4.1.0) [i386, m68k]
    X Keyboard Extension (XKB) configuration data and metapackage

Download clustalx

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 268.2 kB772 kB [list of files]
amd64 (unofficial port) 234.2 kB660 kB [list of files]
arm 229.0 kB644 kB [list of files]
hppa 241.4 kB672 kB [list of files]
i386 208.5 kB620 kB [list of files]
ia64 304.8 kB968 kB [list of files]
m68k 196.1 kB600 kB [list of files]
mips 241.0 kB864 kB [list of files]
powerpc 237.3 kB668 kB [list of files]
s390 229.6 kB676 kB [list of files]
sparc 222.8 kB585 kB [list of files]