Package: velvet (1.0.02~nozlibcopy-1)

[ Source: velvet  ]

Nucleic acid sequence assembler for very short reads

Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs.

Tags: Biology: Nucleic Acids, Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Purpose: Analysing

Other Packages Related to velvet

• dep: libc6 (>= 2.7)

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: zlib1g (>= 1:1.2.0.2)

  compressiebibliotheek - programma's

• rec: python

  interactive high-level object-oriented language (default version)

• sug: velvet-example

  Example data for the Velvet sequence assembler

Download velvet

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Architecture	Package Size	Installed Size	Files
s390	693.9 kB	1,388.0 kB	[list of files]