Package: blast2 (1:2.2.21.20090809-2)

[ Source: ncbi-tools6  ]

Basic Local Alignment Search Tool

The famous sequence alignment program. This is "official" NCBI version, #2. The blastall executable allows you to give a nucleotide or protein sequence to the program. It is compared against databases and a summary of matches is returned to the user.

Note that databases are not included in Debian; they must be retrieved manually.

Tags: Biology: biology::format:fasta, Nucleic Acids, Proteins, Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Science: Calculation, Scope: Utility, Purpose: Searching, Works with: Biological Sequence

Other Packages Related to blast2

• dep: libc6 (>= 2.7)

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:4.4.0)

  GCC support bibliotheek

• dep: libncbi6 (<< 6.1.20090809.1)

  NCBI libraries for biology applications

  dep: libncbi6 (>= 6.1.20090809)

• sug: libvibrant6a

  NCBI libraries for graphic biology applications

• sug: ncbi-rrna-data

  large rRNA BLAST databases distributed with the NCBI toolkit

• sug: ncbi-tools-bin

  NCBI libraries for biology applications (text-based utilities)

• sug: ncbi-tools-x11

  NCBI libraries for biology applications (X-based utilities)

Download blast2

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Architecture	Package Size	Installed Size	Files
armel	654.8 kB	1,300.0 kB	[list of files]