Package: seaview (1:2.4-1)

[ Source: seaview  ]

Multiple sequence alignment editor

SeaView is a graphical multiple sequence alignment editor developed by Manolo Gouy. Multiple alignment formats (NEXUS, MSF, CLUSTAL, FASTA, PHYLIP, MASE) are supported for reading and writing. Alignments can be manually edited. The user is further supported by an integration of external programs, i.e., to run DOT-PLOT or MUSCLE, to locally improve the alignment.

When using SeaView for investigations that lead to a publication, please cite the following reference:

Galtier, N., Gouy, M. and Gautier, C. (1996) "SeaView and Phylo_win, two graphic tools for sequence alignment and molecular phylogeny." Comput. Applic. Biosci. 12:543-548.

Tags: Field: Biology, Bioinformatics, Implemented in: C, C++, User Interface: X Window System, Networking: Client, Role: Program, Scope: Utility, Interface Toolkit: FLTK, Purpose: Comparing, Editing, Printing, Data Visualization, Supports Format: Plain Text, X Window System: Application

Other Packages Related to seaview

• dep: libc6 (>= 2.7-1) [not alpha, ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libc6.1 (>= 2.7-1) [alpha, ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

• dep: libfltk1.1 (>= 1.1.6)

  Fast Light Toolkit - shared libraries

• dep: libgcc1 (>= 1:4.1.1-21) [not arm, armel, hppa]

  GCC support library

  dep: libgcc1 (>= 1:4.3) [arm, armel]

• dep: libgcc4 (>= 4.1.1-21) [hppa]

  GCC support library

• dep: libstdc++6 (>= 4.1.1-21) [not armel]

  The GNU Standard C++ Library v3

  dep: libstdc++6 (>= 4.3) [armel]

• dep: libunwind7 (>= 0.98.5-6) [ia64]

  A library to determine the call-chain of a program - runtime

• dep: libx11-6

  X11 client-side library

• rec: xterm

  X terminal emulator

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: muscle

  Multiple alignment program of protein sequences

Download seaview

Download for all available architectures

Architecture	Package Size	Installed Size	Files
alpha	173.7 kB	464.0 kB	[list of files]
amd64	151.7 kB	400.0 kB	[list of files]
arm	146.6 kB	384.0 kB	[list of files]
armel	144.5 kB	380.0 kB	[list of files]
hppa	165.7 kB	412.0 kB	[list of files]
i386	146.3 kB	388.0 kB	[list of files]
ia64	216.1 kB	616.0 kB	[list of files]
mips	166.2 kB	480.0 kB	[list of files]
mipsel	166.5 kB	480.0 kB	[list of files]
powerpc	162.9 kB	424.0 kB	[list of files]
s390	153.3 kB	400.0 kB	[list of files]
sparc	146.1 kB	388.0 kB	[list of files]