Package: mummer (3.20-3)

Links for mummer

Debian Resources:

Download Source Package mummer:

Maintainers:

Debian-Med Packaging Team (QA Page, Mail Archive)
Steffen Moeller (QA Page)
Andreas Tille (QA Page)
Charles Plessy (QA Page)

External Resources:

Homepage [mummer.sourceforge.net]

Similar packages:

Efficient sequence alignment of full genomes

MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.

Tags: Field: Biology, Role: Program

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Download mummer

Download for all available architectures
Architecture	Package Size	Installed Size	Files
alpha	420.8 kB	1312 kB	[list of files]
amd64	392.3 kB	1156 kB	[list of files]
arm	395.0 kB	1088 kB	[list of files]
armel	366.9 kB	1048 kB	[list of files]
hppa	433.3 kB	1168 kB	[list of files]
i386	370.1 kB	972 kB	[list of files]
ia64	566.0 kB	1856 kB	[list of files]
mips	408.4 kB	1300 kB	[list of files]
mipsel	409.9 kB	1292 kB	[list of files]
powerpc	420.8 kB	1184 kB	[list of files]
s390	379.7 kB	1084 kB	[list of files]
sparc	378.0 kB	1108 kB	[list of files]