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[ Source: ncbi-tools6  ]

Package: blast2 (1:2.2.18.20080302-4)

Basic Local Alignment Search Tool

The famous sequence alignment program. This is "official" NCBI version, #2. The blastall executable allows you to give a nucleotide or protein sequence to the program. It is compared against databases and a summary of matches is returned to the user.

Note that databases are not included in Debian; they must be retrieved manually.

Tags: Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Searching

Other Packages Related to blast2

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7-1) [not alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libc6.1 (>= 2.7-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libgcc1 (>= 1:4.3) [armel]
    GCC support library
  • dep: libncbi6 (<< 6.1.20080302.1)
    NCBI libraries for biology applications
    dep: libncbi6 (>= 6.1.20080302)
  • sug: libvibrant6a
    NCBI libraries for graphic biology applications
  • sug: ncbi-tools-bin
    NCBI libraries for biology applications (text-based utilities)
  • sug: ncbi-tools-x11
    NCBI libraries for biology applications (X-based utilities)

Download blast2

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 666.7 kB1460 kB [list of files]
amd64 650.7 kB1293 kB [list of files]
arm 630.1 kB1224 kB [list of files]
armel 638.8 kB1264 kB [list of files]
hppa 641.1 kB1268 kB [list of files]
i386 622.4 kB1192 kB [list of files]
ia64 726.4 kB1696 kB [list of files]
mips 627.1 kB1336 kB [list of files]
mipsel 626.0 kB1336 kB [list of files]
powerpc 685.5 kB1400 kB [list of files]
s390 655.2 kB1312 kB [list of files]
sparc 632.8 kB1268 kB [list of files]