Package: autodock (4.2.3-2)

[ Source: autodocksuite  ]

analysis of ligand binding to protein structure

AutoDock is a prime representative of the programs addressing the simulation of the docking of fairly small chemical ligands to rather big protein receptors. Earlier versions had all flexibility in the ligands while the protein was kept rather ridgid. This latest version 4 also allows for a flexibility of selected sidechains of surface residues, i.e., takes the rotamers into account.

The AutoDock program performs the docking of the ligand to a set of grids describing the target protein. AutoGrid pre-calculates these grids.

Tags: Field: Biology, Structural Biology, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, works-with-format::TODO, Works with: 3D Model, Need an extra tag

Other Packages Related to autodock

• dep: libc0.1 (>= 2.3) [kfreebsd-amd64, kfreebsd-i386]

  組込用 GNU C ライブラリ: 共有ライブラリ
  also a virtual package provided by libc0.1-udeb

• dep: libc6 (>= 2.1.3) [i386]

  組込用 GNU C ライブラリ: 共有ライブラリ
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.13) [s390x]

  dep: libc6 (>= 2.2) [mips, mipsel]

  dep: libc6 (>= 2.2.5) [amd64]

  dep: libc6 (>= 2.4) [armel, armhf, powerpc, s390]

  dep: libc6 (>= 2.6) [sparc]

• dep: libc6.1 (>= 2.2) [ia64]

  組込用 GNU C ライブラリ: 共有ライブラリ
  also a virtual package provided by libc6.1-udeb

• dep: libgcc1 (>= 1:4.1.1) [not armel, armhf]

  GCC 共有ライブラリ

  dep: libgcc1 (>= 1:4.4.0) [armel, armhf]

• dep: libstdc++6 (>= 4.1.1) [not armel, armhf]

  GNU 標準 C++ ライブラリ v3

  dep: libstdc++6 (>= 4.4.0) [armel, armhf]

• dep: libunwind7 [ia64]

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• sug: autodocktools

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• sug: autogrid

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Download autodock

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	182.0 kB	464.0 kB	[list of files]
armel	183.3 kB	436.0 kB	[list of files]
armhf	164.5 kB	324.0 kB	[list of files]
i386	164.6 kB	448.0 kB	[list of files]
ia64	283.0 kB	960.0 kB	[list of files]
kfreebsd-amd64	182.1 kB	458.0 kB	[list of files]
kfreebsd-i386	165.3 kB	442.0 kB	[list of files]
mips	185.0 kB	476.0 kB	[list of files]
mipsel	186.3 kB	476.0 kB	[list of files]
powerpc	186.0 kB	436.0 kB	[list of files]
s390	171.0 kB	424.0 kB	[list of files]
s390x	181.7 kB	438.0 kB	[list of files]
sparc	189.5 kB	456.0 kB	[list of files]