[ ソース: readucks ]
パッケージ: readucks (0.0.3-5)
Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)
This package is inspired by the demultiplexing options in porechop but without the adapter trimming options - it just demuxes. It uses the parasail library with its Python bindings to do pairwise alignment which provides a considerable speed up over the seqan library used by porechop due to its low-level use of vector processor instructions.
その他の readucks 関連パッケージ
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- dep: python3
- 対話式の高レベルオブジェクト指向言語 (デフォルト python3 バージョン)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-parasail
- Python3 bindings for the parasail C library