[ ソース: blasr ]
パッケージ: blasr (5.3.5+dfsg-6)
mapping single-molecule sequencing reads
Basic local alignment with successive refinement (BLASR) is a method for mapping single-molecule sequencing reads against a reference genome. Such reads are thousands of bases long, with divergence between them and the genome being dominated by insertion and deletion error.
その他の blasr 関連パッケージ
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- dep: libblasr5.3.5 (>= 5.3.5+dfsg)
- tools for aligning PacBio reads to target sequences
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- dep: libc6 (>= 2.34)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC 共有ライブラリ
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- dep: libhdf5-cpp-103-1 (>= 1.10.5)
- HDF5 - C++ runtime files - serial version
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- dep: libpbbam2.1.0 (>= 2.1.0+dfsg)
- Pacific Biosciences binary alignment/map (BAM) library
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- dep: libpbcopper2.0.0 (>= 2.0.0+dfsg)
- data structures, algorithms, and utilities for C++ applications
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- dep: libpbseq (>= 5.3.5+dfsg-4~)
- library for analyzing PacBio sequencing data
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- dep: libstdc++6 (>= 11)
- GNU 標準 C++ ライブラリ v3