Package: blast2 (1:2.2.25.20110713-6 and others)

[ Source: ncbi-tools6  ]

Basic Local Alignment Search Tool

Il famoso programma di allineamento di sequenze. Questa è la versione "ufficiale" NCBI, numero 2. L'eseguibile blastall permette di passare al programma una sequenza di nucleotidi o una sequenza proteica, questa viene confrontata con dei database e all'utente viene dato un riassunto delle corrispondenze.

Si noti che i database non sono inclusi in Debian: devono essere recuperati manualmente.

Tags: Biology: Nucleic Acids, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Science: science::calculation, scope::utility, Purpose: Searching, Works with: Biological Sequence

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• dep: libc0.3 (>= 2.13-31) [hurd-i386]

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• dep: libc6 (>= 2.11) [hppa]

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  dep: libc6 (>= 2.13) [s390x, sh4]

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  dep: libc6 (>= 2.5) [avr32]

  dep: libc6 (>= 2.5-5) [m68k]

  dep: libc6 (>= 2.7) [amd64, armel, i386, mips, mipsel, powerpc, powerpcspe, s390, sparc, sparc64]

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Download blast2

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1:2.2.25.20110713-4	668.6 kB	1,348.0 kB	[list of files]
amd64	1:2.2.25.20110713-6	666.2 kB	1,284.0 kB	[list of files]
armel	1:2.2.25.20110713-6	654.3 kB	1,205.0 kB	[list of files]
armhf	1:2.2.25.20110713-6	623.8 kB	1,105.0 kB	[list of files]
avr32 (unofficial port)	1:2.2.21.20090809-1	614.0 kB	1,176.0 kB	[list of files]
hppa	1:2.2.24.20100808-2	637.6 kB	1,276.0 kB	[list of files]
hurd-i386	1:2.2.25.20110713-4+b1	634.9 kB	1,168.0 kB	[list of files]
i386	1:2.2.25.20110713-6	653.9 kB	1,222.0 kB	[list of files]
ia64	1:2.2.25.20110713-5	731.9 kB	1,532.0 kB	[list of files]
kfreebsd-amd64	1:2.2.25.20110713-6	651.5 kB	1,228.0 kB	[list of files]
kfreebsd-i386	1:2.2.25.20110713-6	634.0 kB	1,137.0 kB	[list of files]
m68k (unofficial port)	1:2.2.18.20080302-4	615.3 kB	1,224.0 kB	[list of files]
mips	1:2.2.25.20110713-6	625.8 kB	1,188.0 kB	[list of files]
mipsel	1:2.2.25.20110713-4	624.9 kB	1,157.0 kB	[list of files]
powerpc	1:2.2.25.20110713-6	651.6 kB	1,222.0 kB	[list of files]
powerpcspe (unofficial port)	1:2.2.25.20110713-1	620.7 kB	1,232.0 kB	[list of files]
s390	1:2.2.25.20110713-6	664.0 kB	1,255.0 kB	[list of files]
s390x	1:2.2.25.20110713-6	671.5 kB	1,356.0 kB	[list of files]
sh4 (unofficial port)	1:2.2.25.20110713-4	650.7 kB	1,158.0 kB	[list of files]
sparc	1:2.2.25.20110713-4	630.0 kB	1,127.0 kB	[list of files]
sparc64 (unofficial port)	1:2.2.25.20110713-4	640.0 kB	1,249.0 kB	[list of files]