Package: biosquid (1.9g+cvs20050121-2)

[ Source: biosquid  ]

utilities for biological sequence analysis

SQUID is a library of C code functions for sequence analysis. It also includes a number of small utility programs to convert, show statistics, manipulate and do other functions on sequence files.

The original name of the package is "squid", but since there is already a squid on the archive (a proxy cache), it was renamed to "biosquid".

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, use::converting, Editing, Supports Format: works-with-format::TODO, works-with::TODO

Other Packages Related to biosquid

• dep: libc0.1 (>= 2.3) [kfreebsd-amd64, kfreebsd-i386]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc0.1-udeb

• dep: libc6 (>= 2.13) [s390x]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.4) [armhf]

  dep: libc6 (>= 2.7-1) [not armhf, ia64, kfreebsd-amd64, kfreebsd-i386, s390x]

• dep: libc6.1 (>= 2.7-1) [ia64]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

• rec: hmmer (>> 2.1.4)

  profile hidden Markov models for protein sequence analysis

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Architecture	Package Size	Installed Size	Files
amd64	735.5 kB	1,616.0 kB	[list of files]
armel	698.2 kB	1,488.0 kB	[list of files]
armhf	613.4 kB	962.0 kB	[list of files]
i386	659.8 kB	1,440.0 kB	[list of files]
ia64	1,162.3 kB	3,252.0 kB	[list of files]
kfreebsd-amd64	758.0 kB	1,568.0 kB	[list of files]
kfreebsd-i386	671.4 kB	1,374.0 kB	[list of files]
mips	767.6 kB	2,064.0 kB	[list of files]
mipsel	772.1 kB	2,064.0 kB	[list of files]
powerpc	743.6 kB	1,696.0 kB	[list of files]
s390	713.8 kB	1,568.0 kB	[list of files]
s390x	791.5 kB	1,737.0 kB	[list of files]
sparc	667.9 kB	1,480.0 kB	[list of files]