Package: muscle (1:3.8.31-1 and others)

[ Source: muscle  ]

Multiple alignment program of protein sequences

MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there.

Tags: Biology: Clustal/ALN, Nucleic Acids, biology::peptidic, field::biology, Field: Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to muscle

• dep: libc0.1 (>= 2.4) [kfreebsd-amd64, kfreebsd-i386]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc0.1-udeb

• dep: libc0.3 (>= 2.7-1) [hurd-i386]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc0.3-udeb

• dep: libc6 (>= 2.11) [powerpcspe]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.13) [s390x, sh4]

  dep: libc6 (>= 2.2) [mipsel]

  dep: libc6 (>= 2.3.4) [mips]

  dep: libc6 (>= 2.4) [amd64, armel, armhf, i386, powerpc, s390, sparc64]

  dep: libc6 (>= 2.5) [avr32]

  dep: libc6 (>= 2.5-5) [m68k]

  dep: libc6 (>= 2.6) [sparc]

  dep: libc6 (>= 2.7-1) [hppa]

• dep: libc6.1 (>= 2.3.4) [ia64]

  Embedded GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.4) [alpha]

• dep: libgcc1 [powerpcspe]

  GCC támogató programkönyvtár

  dep: libgcc1 (>= 1:4.1.1) [not armel, armhf, avr32, hppa, hurd-i386, m68k, powerpcspe]

  dep: libgcc1 (>= 1:4.2.1) [avr32, hurd-i386]

  dep: libgcc1 (>= 1:4.4.0) [armel, armhf]

• dep: libgcc2 (>= 4.2.1-1) [m68k]

  GCC támogató programkönyvtár

• dep: libgcc4 (>= 4.1.1-21) [hppa]

  GCC támogató programkönyvtár

• dep: libstdc++6 [powerpcspe]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 4.1.1) [not armel, armhf, avr32, hppa, hurd-i386, m68k, powerpcspe]

  dep: libstdc++6 (>= 4.1.1-21) [hppa, m68k]

  dep: libstdc++6 (>= 4.2.1) [avr32, hurd-i386]

  dep: libstdc++6 (>= 4.3.0) [armel, armhf]

• dep: libunwind7 [ia64]

  A library to determine the call-chain of a program - runtime

Download muscle

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1:3.8.31-1	201.2 kB	573.0 kB	[list of files]
amd64	1:3.8.31-1	164.9 kB	468.0 kB	[list of files]
armel	1:3.8.31-1	150.0 kB	422.0 kB	[list of files]
armhf	1:3.8.31-1	137.1 kB	352.0 kB	[list of files]
avr32 (unofficial port)	3.70+fix1-2	162.0 kB	428.0 kB	[list of files]
hppa	3.70+fix1-2	185.0 kB	524.0 kB	[list of files]
hurd-i386	3.70+fix1-2	156.6 kB	488.0 kB	[list of files]
i386	1:3.8.31-1	159.9 kB	458.0 kB	[list of files]
ia64	1:3.8.31-1	245.4 kB	761.0 kB	[list of files]
kfreebsd-amd64	1:3.8.31-1	164.3 kB	430.0 kB	[list of files]
kfreebsd-i386	1:3.8.31-1	159.6 kB	421.0 kB	[list of files]
m68k (unofficial port)	3.70+fix1-2	150.1 kB	468.0 kB	[list of files]
mips	1:3.8.31-1	171.7 kB	505.0 kB	[list of files]
mipsel	1:3.8.31-1	171.2 kB	503.0 kB	[list of files]
powerpc	1:3.8.31-1	177.5 kB	488.0 kB	[list of files]
powerpcspe (unofficial port)	3.70+fix1-2+b100	182.9 kB	520.0 kB	[list of files]
s390	1:3.8.31-1	169.0 kB	472.0 kB	[list of files]
s390x	1:3.8.31-1	174.7 kB	508.0 kB	[list of files]
sh4 (unofficial port)	1:3.8.31-1	170.8 kB	460.0 kB	[list of files]
sparc	1:3.8.31-1	160.1 kB	453.0 kB	[list of files]
sparc64 (unofficial port)	1:3.8.31-1	164.4 kB	424.0 kB	[list of files]