Paketti: r-bioc-singlecellexperiment (1.24.0+ds-1)

[ Source: r-bioc-singlecellexperiment  ]

S4 Classes for Single Cell Data

Defines a S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.

Muut pakettiin r-bioc-singlecellexperiment liittyvät paketit

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.18

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-scrnaseq (>= 2.9.1)

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-rtsne

  GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut

• sug: r-cran-testthat

  GNU R testsuite

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