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[ Source: clustalw  ]

Package: clustalx (1.83-1.2) [non-free]

[Biology] GUI for clustalw

GUI interface for the ClustalW multiple sequence alignment program. It provides an integrated environment for performing multiple sequence and profile alignments and analysing the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated allowing you to highlight conserved features in the alignment. The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment.

You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

Alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted. 

 URL: ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/
 URL: ftp://ftp.ebi.ac.uk/pub/software/unix/clustalx/

Tags: Field: Biology, Interface Toolkit: Lesstif/Motif

Other Packages Related to clustalx

  • depends
  • recommends
  • suggests
  • dep: clustalw
    [Biology] Global multiple nucleotide or peptide sequence alignment
  • dep: lesstif2
    OSF/Motif 2.1 implementation released under LGPL
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libncbi6 (>= 6.1.20061015)
    NCBI libraries for biology applications
  • dep: libvibrant6a (>= 6.1.20061015)
    NCBI libraries for graphic biology applications
  • dep: libx11-6
    X11 client-side library
  • dep: libxmu6
    X11 miscellaneous utility library
  • dep: libxt6
    X11 toolkit intrinsics library

Download clustalx

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 269.5 kB776 kB [list of files]
amd64 241.4 kB660 kB [list of files]
arm 234.4 kB648 kB [list of files]
hppa 246.0 kB676 kB [list of files]
i386 224.3 kB648 kB [list of files]
ia64 322.2 kB1040 kB [list of files]
mips 254.2 kB780 kB [list of files]
mipsel 254.1 kB780 kB [list of files]
powerpc 241.7 kB680 kB [list of files]
s390 235.4 kB668 kB [list of files]
sparc 227.2 kB652 kB [list of files]