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[ Source: epcr  ]

Package: ncbi-epcr (1.2.0-3 and others)

[Biology] Tool to test a DNA sequence for the presence of sequence tagged sites

Electronic PCR feature to test a DNA sequence for the presence of sequence tagged sites. e-PCR looks for STSs in DNA sequences by searching for subsequences that closely match the PCR primers and have the correct order, orientation, and spacing that they could plausibly prime the amplification of a PCR product of the correct molecular weight (Schuler, Genome Research 7:541-50, 1997).

Homepage: http://www.ncbi.nlm.nih.gov/genome/sts/epcr.cgi

Tags: Field: Biology, Role: Program, Scope: Utility

Other Packages Related to ncbi-epcr

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libgcc1 (>= 1:4.0.2) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.1.1-12) [not amd64, hppa]
  • dep: libgcc4 (>= 4.1.1-12) [hppa]
    GCC support library
  • dep: libstdc++6 (>= 4.0.2-4) [amd64]
    The GNU Standard C++ Library v3
    dep: libstdc++6 (>= 4.1.1-12) [not amd64]
  • dep: libunwind7 (>= 0.98.5-6) [ia64]
    A library to determine the call-chain of a program - runtime
  • rec: bioperl
    Perl tools for computational molecular biology
  • rec: ncbi-epcr-data
    [Biology] NCBI public STS data

Download ncbi-epcr

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha 1.2.0-3+b1 16.3 kB84 kB [list of files]
amd64 1.2.0-3 15.2 kB80 kB [list of files]
arm 1.2.0-3+b1 13.6 kB76 kB [list of files]
hppa 1.2.0-3+b1 16.4 kB80 kB [list of files]
i386 1.2.0-3+b1 14.4 kB76 kB [list of files]
ia64 1.2.0-3+b1 19.7 kB96 kB [list of files]
mips 1.2.0-3+b1 16.5 kB88 kB [list of files]
mipsel 1.2.0-3+b1 16.5 kB88 kB [list of files]
powerpc 1.2.0-3+b1 15.4 kB80 kB [list of files]
s390 1.2.0-3+b1 14.9 kB80 kB [list of files]
sparc 1.2.0-3+b1 13.6 kB76 kB [list of files]