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[ Source: muscle  ]

Package: muscle (3.60-1)

[Biology] multiple alignment program of protein sequences

MUSCLE is a multiple alignment program for protein sequences. MUSCLE stands for multiple sequence comparison by log-expectation. In the authors tests, MUSCLE achieved the highest scores of all tested programs on several alignment accuracy benchmarks, and is also one of the fastest programs out there. 

 Homepage: http://www.drive5.com/muscle/

Tags: Field: Biology, Implemented in: C++, User Interface: Command Line, Role: Program, Scope: Utility, Supports Format: Plain Text

Other Packages Related to muscle

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libgcc1 (>= 1:4.1.0) [not hppa, powerpc]
    GCC support library
    dep: libgcc1 (>= 1:4.1.1-12) [powerpc]
  • dep: libgcc4 (>= 4.1.0) [hppa]
    GCC support library
  • dep: libstdc++6 (>= 4.1.0) [not powerpc]
    The GNU Standard C++ Library v3
    dep: libstdc++6 (>= 4.1.1-12) [powerpc]
  • dep: libunwind7 (>= 0.98.5-6) [ia64]
    A library to determine the call-chain of a program - runtime
  • sug: muscle-doc
    [Biology] documentation to sequence alignment program

Download muscle

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 292.6 kB656 kB [list of files]
amd64 226.6 kB544 kB [list of files]
arm 219.8 kB476 kB [list of files]
hppa 268.0 kB580 kB [list of files]
i386 214.5 kB552 kB [list of files]
ia64 380.4 kB1004 kB [list of files]
mips 264.5 kB732 kB [list of files]
mipsel 264.7 kB732 kB [list of files]
powerpc 256.3 kB572 kB [list of files]
s390 220.1 kB552 kB [list of files]
sparc 214.0 kB544 kB [list of files]