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[ Source: debian-med  ]

Links for med-bio

Debian Resources:

• Bug Reports
• Developer Information (PTS)
• Debian Changelog
• Copyright File

Download Source Package debian-med:

• [debian-med_0.12.dsc]
• [debian-med_0.12.tar.gz]

Maintainers:

• Andreas Tille (QA Page)
• Debian-Med Packaging Team (QA Page, Mail Archive)

Similar packages:

• med-bio-dev
• med-typesetting
• science-biology
• med-imaging-dev
• med-imaging
• med-physics
• med-cms
• med-epi
• med-doc

Other Packages Related to med-bio

depends

recommends

suggests

• dep: amap-align

  Protein multiple alignment by sequence annealing

• dep: biosquid

  utilities for biological sequence analysis

• dep: blast2

  Basic Local Alignment Search Tool

• dep: boxshade

  [Biology] Pretty-printing of multiple sequence alignments

• dep: dialign

  Segment-based multiple sequence alignment

• dep: fastdnaml

  [Biology] Tool for construction of phylogenetic trees of DNA sequences

• dep: fastlink

  [Biology] A faster version of pedigree programs of Linkage

• dep: garlic

  A visualization program for biomolecules

• dep: gdpc

  visualiser of molecular dynamic simulations

• dep: gff2aplot

  pair-wise alignment-plots for genomic sequences in PostScript

• dep: gff2ps

  produces PostScript graphical output from GFF-files

• dep: ghemical

  A GNOME molecular modelling environment

• dep: gromacs

  Molecular dynamics simulator, with building and analysis tools

• dep: hmmer

  profile hidden Markov models for protein sequence analysis

• dep: kalign

  Global and progressive multiple sequence alignment

• dep: loki

  [Biology] MCMC linkage analysis on general pedigrees

• dep: med-common (= 0.12)

  Debian-Med Project common package

• dep: mipe

  [Biology] Tools to store PCR-derived data

• dep: muscle

  [Biology] multiple alignment program of protein sequences

• dep: ncbi-epcr

  [Biology] Tool to test a DNA sequence for the presence of sequence tagged sites

• dep: ncbi-tools-bin

  NCBI libraries for biology applications (text-based utilities)

• dep: ncbi-tools-x11

  NCBI libraries for biology applications (X-based utilities)

• dep: njplot

  [Biology] A tree drawing program

• dep: perlprimer

  [Biology] graphical design of primers for PCR

• dep: poa

  Partial Order Alignment for multiple sequence alignment

• dep: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• dep: pymol

  An OpenGL Molecular Graphics System written in Python

• dep: r-cran-qtl

  GNU R package for genetic marker linkage analysis

• dep: rasmol

  Visualize biological macromolecules

• dep: readseq

  [Biology] Conversion between sequence formats

• dep: sim4

  tool for aligning cDNA and genomic DNA

• dep: t-coffee

  [Biology] Multiple Sequence Alignment

• dep: tigr-glimmer

  [Biology] Gene detection in archea and bacteria

• dep: tree-puzzle

  [Biology] Reconstruction of phylogenetic trees by maximum likelihood

  or tree-ppuzzle

  [Biology] Reconstruction of phylogenetic trees by maximum likelihood

• dep: wise

  comparison of biopolymers, commonly DNA and protein sequences

• rec: textopo

  [Biology] LaTeX presentation of topology of transmembrane proteins

• sug: arb

  Package not available

• sug: bugsx

  program to evolve biomorphs using genetic algorithms

• sug: clustalw

  [Biology] Global multiple nucleotide or peptide sequence alignment

• sug: clustalw-mpi

  [Biology] MPI-distributed global sequence alignment with ClustalW

• sug: clustalx

  [Biology] GUI for clustalw

• sug: molphy

  [Biology] Program Package for MOLecular PHYlogenetics

• sug: mozilla-biofox

  extension of bioinformatics tools to Mozilla and Iceweasel browsers

• sug: phylip

  [Biology] A package of programs for inferring phylogenies

• sug: seaview

  [Biology] Multiple sequence alignment editor

• sug: treetool

  [Biology] An interactive tool for displaying trees

• sug: wise-doc

  documentation for the wise package

Download med-bio

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	13.1 kB	164 kB	[list of files]