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[ Source: hmmer  ]

Package: hmmer-pvm (2.3.2-2)

HMMER programs with PVM (Parallel Virtual Machine) support

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

This package contains HMMER programs compiled with PVM support. 

 Homepage: http://hmmer.wustl.edu/

Tags: Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility

Other Packages Related to hmmer-pvm

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libpvm3
    Parallel Virtual Machine - shared libraries
  • dep: pvm
    Parallel Virtual Machine - binaries
  • sug: hmmer-doc (>= 2.3.2-2)
    profile hidden Markov models for protein sequence analysis (docs)

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Architecture Package Size Installed Size Files
alpha 432.2 kB1020 kB [list of files]
amd64 369.6 kB808 kB [list of files]
arm 334.9 kB700 kB [list of files]
hppa 388.6 kB788 kB [list of files]
i386 347.2 kB736 kB [list of files]
ia64 606.4 kB1720 kB [list of files]
mips 392.3 kB1024 kB [list of files]
mipsel 395.2 kB1024 kB [list of files]
powerpc 374.8 kB832 kB [list of files]
s390 355.7 kB772 kB [list of files]
sparc 338.5 kB744 kB [list of files]