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[ Source: ncbi-tools6  ]

Package: blast2 (1:2.2.15.20061015-1)

Basic Local Alignment Search Tool

The famous sequence alignment program. This is "official" NCBI version, #2. The blastall executable allows you to give a nucleotide or protein sequence to the program. It is compared against databases and a summary of matches is returned to the user.

Note that databases are not included in Debian; they must be retrieved manually.

Tags: Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Searching

Other Packages Related to blast2

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1) [not alpha, i386, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.3.6-6) [i386]
  • dep: libc6.1 (>= 2.3.5-1) [alpha, ia64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6.1-udeb
  • dep: libncbi6 (<< 6.1.20061015.1)
    NCBI libraries for biology applications
    dep: libncbi6 (>= 6.1.20061015)
  • sug: libvibrant6a
    NCBI libraries for graphic biology applications
  • sug: ncbi-tools-bin
    NCBI libraries for biology applications (text-based utilities)
  • sug: ncbi-tools-x11
    NCBI libraries for biology applications (X-based utilities)

Download blast2

Download for all available architectures
Architecture Package Size Installed Size Files
alpha 656.0 kB1520 kB [list of files]
amd64 669.3 kB1349 kB [list of files]
arm 639.8 kB1284 kB [list of files]
hppa 638.9 kB1340 kB [list of files]
i386 626.7 kB1304 kB [list of files]
ia64 725.8 kB1760 kB [list of files]
mips 635.4 kB1420 kB [list of files]
mipsel 635.0 kB1420 kB [list of files]
powerpc 644.3 kB1368 kB [list of files]
s390 641.0 kB1356 kB [list of files]
sparc 617.6 kB1304 kB [list of files]