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[ Source: hmmer  ]

Package: hmmer-pvm (2.3.2-2)

HMMER programs with PVM (Parallel Virtual Machine) support

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

This package contains HMMER programs compiled with PVM support. 

 Homepage: http://hmmer.wustl.edu/

Tags: Field: Biology, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility

Other Packages Related to hmmer-pvm

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.3.5-1)
    GNU C Library: Shared libraries
  • dep: libpvm3
    Parallel Virtual Machine - shared libraries
  • dep: pvm
    Parallel Virtual Machine - binaries
  • sug: hmmer-doc (>= 2.3.2-2)
    profile hidden Markov models for protein sequence analysis (docs)

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