Package: poa (2.0+20060928-3)

[ Source: poa  ]

Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, works-with-format::plaintext, Works with: Need an extra tag

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Architecture	Package Size	Installed Size	Files
amd64	49.7 kB	164.0 kB	[list of files]
armel	52.6 kB	176.0 kB	[list of files]
armhf	47.8 kB	155.0 kB	[list of files]
i386	46.5 kB	155.0 kB	[list of files]
ia64	72.6 kB	293.0 kB	[list of files]
kfreebsd-amd64	49.7 kB	125.0 kB	[list of files]
kfreebsd-i386	46.5 kB	116.0 kB	[list of files]
mips	44.9 kB	186.0 kB	[list of files]
mipsel	45.2 kB	186.0 kB	[list of files]
powerpc	47.6 kB	180.0 kB	[list of files]
s390	51.4 kB	171.0 kB	[list of files]
s390x	57.3 kB	196.0 kB	[list of files]
sparc	45.3 kB	179.0 kB	[list of files]