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[ Source: kalign  ]

Package: kalign (2.04-2 and others)

Alineación de secuencias múltiples global y progresiva

Kalign es una herramienta de consola para realizar el alineamiento de múltiples secuencias biológicas. Emplea el algoritmo de la cadena de equiparación Muth-Manber, a fin de mejorar tanto la precisión como la velocidad de la adaptación. Se utiliza la adaptación global progresiva, enriquecida mediante el empleo de un algoritmo de aproximación de la cadena de equiparación para calcular las secuencias de distancias y la incorporación de las coincidencias locales en otras adaptaciones globales.

Tags: Biology: Clustal/ALN, biology::format:fasta, Nucleic Acids, Proteins, Field: Biology, Bioinformatics, Implemented in: C, User Interface: Command Line, Role: Program, Scope: Utility, Purpose: Comparing, Supports Format: Plain Text

Other Packages Related to kalign

  • depends
  • recommends
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  • dep: libc0.1 (>= 2.3) [kfreebsd-amd64, kfreebsd-i386]
    Biblioteca de C de GNU: Bibliotecas compartidas
    also a virtual package provided by libc0.1-udeb
  • dep: libc0.3 (>= 2.9) [hurd-i386]
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  • dep: libc6 (>= 2.3) [amd64, hppa, i386, mips, mipsel]
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    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.4) [armel, powerpc, s390]
    dep: libc6 (>= 2.5) [avr32]
    dep: libc6 (>= 2.5-5) [m68k]
    dep: libc6 (>= 2.6) [sparc]
  • dep: libc6.1 (>= 2.3) [ia64]
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    also a virtual package provided by libc6.1-udeb
    dep: libc6.1 (>= 2.4) [alpha]

Download kalign

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha 2.04-2 103.9 kB316 kB [list of files]
amd64 2.04-2 98.9 kB288 kB [list of files]
armel 2.04-2 104.5 kB284 kB [list of files]
avr32 (unofficial port) 2.04-2 100.1 kB216 kB [list of files]
hppa 2.04-2 93.7 kB264 kB [list of files]
hurd-i386 2.04-2 85.9 kB264 kB [list of files]
i386 2.04-2 85.7 kB264 kB [list of files]
ia64 2.04-2 152.8 kB532 kB [list of files]
kfreebsd-amd64 2.04-2 98.8 kB276 kB [list of files]
kfreebsd-i386 2.04-2 85.9 kB228 kB [list of files]
m68k (unofficial port) 2.04-1 70.1 kB228 kB [list of files]
mips 2.04-2 91.4 kB308 kB [list of files]
mipsel 2.04-2 92.1 kB308 kB [list of files]
powerpc 2.04-2 94.3 kB280 kB [list of files]
s390 2.04-2 93.7 kB268 kB [list of files]
sparc 2.04-2 81.9 kB256 kB [list of files]