2008
clustalx (1.83-4) unstable; urgency=low
[ Charles Plessy ]
* Transient package while Clustal X version > 2.0 is being relicenced.
This package is the same as clustalw-1.83-3 except that it only builds
the clustalx binary package (plus some minor improvements described in
this changelog. In parallel, the Debian clustalw source package will
stop building the clustalx binary package.
* Association between Clustal X and .aln files:
- text/x-clustalw-alignment associated to clustalx in clustalx.desktop.
- .aln declared as text/x-clustalw-alignment in clustalx.sharedmimeinfo.
- text/x-clustalw-alignment associated to clustalx in clustalx.mime.
- debian/rules calls dh_installmime.
* debian/control:
- Allowed upload by Debian Maintainers.
- Added Homepage: field.
- Removed clustalw.
- Checked conformance with Policy 3.7.3.
[ Steffen Moeller ]
* Updated watch file.
* added German translation to desktop file
-- Charles Plessy <charles-debian-nospam@plessy.org> Thu, 21 Feb 2008 13:40:20 +0900
2007
clustalw (1.83-3) unstable; urgency=low
[ Nelson A. de Oliveira ]
* Added watch file, debian/rules get-orig-source
should be used to download the orig.tar.gz, not uscan.
[ Charles Plessy ]
* Build-depend on libncbi6-dev instead of ncbi-tools6-dev.
[ Steffen Moeller ]
* Added dependency to later version lesstif2 (Closes:#429480).
* The recompilation against libvibrant6 was probably
already fixed in an earlier version, certainly it is now
(Closes:#378483).
-- Charles Plessy <charles-debian-nospam@plessy.org> Wed, 12 Sep 2007 16:50:37 +0900
clustalw (1.83-2) unstable; urgency=low
[ Steffen Moeller ] * Help now works in ClustalX (Closes:#215414). * debian/control: - removed [biology] tag and improved debtags - better formatting/wording - suggesting alignment pretty-printers [ Charles Plessy ] * Add Subversion repository URL to debian/control. * FreeDesktop menu added (Closes: #380715) * Acknowledge NMU, thanks to Kai and Fabio. (Closes: #374241, #359712) * Collaborative maintainance: the maintainer is a mailing list, Steffen Moëller and Charles Plessy are uploaders. * Upgraded to debhelper 5. * Modified the copyright file to mention that it is not disallowed to use autobuilders to create binary packages. * Debian Menu transition: Apps/Science becomes Applications/Science/Biology. * Fixed a typo in clustalw.menu (Closes: #428518) * Updated Steffen's email adress. * Using quilt to manage the changes to the sources.
-- Charles Plessy <charles-debian-nospam@plessy.org> Sun, 12 Aug 2007 23:06:39 +0900
2006
clustalw (1.83-1.2) unstable; urgency=high
* Non-maintainer upload. * No changes, let's try to trigger again the builders.
-- Fabio Tranchitella <kobold@debian.org> Fri, 10 Nov 2006 09:16:45 +0100
clustalw (1.83-1.1) unstable; urgency=low
* Non-maintainer upload. * lesstif1 is deprecated, transition to lesstif2 (Closes: #374241) * Dead link in the package description (Closes: #359712) * Updated standards version, binary-indep rule required
-- Kai Hendry <hendry@iki.fi> Mon, 10 Jul 2006 11:04:05 +0900
2003
clustalw (1.83-1) unstable; urgency=low
* New upstream version
* New maintainer
* Reapplied patches from 1.82-3
* Removed calls to insecure gets
* Cosmetics to makefile
* Extension of description
* Standards-Version: 3.5.10
* Increased version of debhelper: Build-Depends: debhelper (>= 4)
* Used debian/compat for debhelper version
* Replaces *.files by *.install, *.docs, *.manpages and used the
apropriate tools in debian/rules
* Moved clustalx to /usr/bin because it does not belong to the
X11 system
* Moved the manpage clustalx.1x to clustalx.1 accordingly.
* Removed debian/dirs
* Added menu entries
-- Steffen Moeller <moeller@pzr.uni-rostock.de> Mon, 23 Jun 2003 19:26:29 +0100
2002
clustalw (1.82-3) unstable; urgency=low
* "My-wifes-Katrin-Birthday"-release (even if I doubt that she is very
interested in Debian packaging details)
* Fix a buffer override
closes: #135255
-- Andreas Tille <tille@debian.org> Wed, 27 Feb 2002 07:26:29 +0100
2001
clustalw (1.82-2) unstable; urgency=low
* also compile GUI clustalx which is included in the sources now
-- Andreas Tille <tille@debian.org> Sat, 3 Nov 2001 14:41:50 +0100
clustalw (1.82-1) unstable; urgency=low
* New maintainer
closes: #100213
* New upstream version
closes: #40904
* Standards-Version: 3.5.6
* Moved help file to /usr/share/clustalw/clustalw_help because it
is architecture independend
* Added URL to the package description because I consider this as
"good style" to have an upstream link without installing the package
* Fixed a typo in the examples Makefile which was shiped with the
Debian package:
clustalw -profile -profile1=nuc.aln -profile2=nuc2.aln -outfile=profile.aln
^ this 2 was missing
-- Andreas Tille <tille@debian.org> Mon, 29 Oct 2001 21:40:20 +0100
clustalw (1.7-9) unstable; urgency=low
* Maintainer set to Debian QA Group <packages@qa.debian.org>.
-- Adrian Bunk <bunk@fs.tum.de> Fri, 24 Aug 2001 21:09:56 +0200
clustalw (1.7-8) unstable; urgency=low
* Adopted by new maintainer; closes: #92790 * Updated to latest standards version and added Build-Depends (changed makefile, control, dirs, docs, and rules); closes: #91132, #91411 * Deleted empty README.Debian file. * Corrected doc path in manpage. * Moved package to section non-free/science, because it is a tool that is exclusively useful for molecular biologists.
-- Dr. Guenter Bechly <gbechly@debian.org> Fri, 20 Apr 2001 19:08:00 +0200
1999
clustalw (1.7-7) unstable; urgency=low
* Better extended description. Closes #31475. * Manual page. Closes #31382.
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Wed, 31 Mar 1999 10:50:02 +0200
1998
clustalw (1.7-6) unstable; urgency=low
* Yet another attempt to get past rejection :-) Licence is now included
in the copyright file.
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Sat, 19 Dec 1998 15:29:40 +0100
clustalw (1.7-5) unstable; urgency=low
* A LICENCE is now included, non-free unfortunately.
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Thu, 17 Dec 1998 14:48:43 +0100
clustalw (1.7-4) unstable; urgency=low
* Compiles with -mieee on the Alpha: otherwise, floating exception since
ClustalW divides by zero (yuck!)
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Wed, 2 Dec 1998 16:16:02 +0100
clustalw (1.7-3) unstable; urgency=low
* Tests and samples added * On line help file added
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Tue, 1 Dec 1998 15:57:50 +0100
clustalw (1.7-2) unstable; urgency=low
* Switch to dh_make * First public release
-- Stephane Bortzmeyer <bortzmeyer@debian.org> Tue, 1 Dec 1998 15:25:13 +0100
clustalw (1.7-1) unstable; urgency=low
* Initial Release.
-- Stephane Bortzmeyer <bortzmeyer@pasteur.fr> Fri, 28 Aug 1998 16:09:48 +0200