This program was downloaded from http://www.shogun-toolbox.org . The main upstream Authors are Soeren Sonnenburg Gunnar Raetsch . Copyright (C) 1999-2009 Fraunhofer Institute FIRST Copyright (C) 1999-2011 Max Planck Society Copyright (C) 2009-2011 Berlin Institute of Technology License: This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files ./classifier/svm/SVM_libsvm.cpp and ./classifier/svm/SVM_libsvm.h are Copyright (c) 2000-2008 Chih-Chung Chang and Chih-Jen Lin License: Copyright (c) 2000-2008 Chih-Chung Chang and Chih-Jen Lin All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither name of copyright holders nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. Quote from the LibSVM homepage: http://www.csie.ntu.edu.tw/~cjlin/libsvm/faq.html#f204 The libsvm license ("the modified BSD license") is compatible with many free software licenses such as GPL. Hence, it is very easy to use libsvm in your software. It can also be used in commercial products. -------- The files classifier/svm/SVM_linear.h, classifier/svm/SVM_linear.cpp, classifier/svm/Tron.cpp and classifier/svm/Tron.h are Copyright (c) 2007-2008 Machine Learning Group at National Taiwan University Contributors LIBLINEAR homepage http://www.csie.ntu.edu.tw/~cjlin/liblinear/ Copyright (c) 2007-2008 The LIBLINEAR Project. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither name of copyright holders nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -------- The files in the directory classifier/svm named gpdt.cpp, gpdt.h, gpdtsolve.cpp, gpdtsolve.h, gpm.cpp, gpm.h are Copyright (C) 2004-2008 by T. Serafini, G. Zanghirati, L. Zanni. COPYRIGHT NOTIFICATION Permission to copy and modify this software and its documentation for internal research use is granted, provided that this notice is retained thereon and on all copies or modifications. The authors and their respective Universities makes no representations as to the suitability and operability of this software for any purpose. It is provided "as is" without express or implied warranty. Use of this software for commercial purposes is expressly prohibited without contacting the authors. This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA On Debian systems, you can find the GPL-2 license in: /usr/share/common-licenses/GPL-2 -------- The files classifier/svm/ssl.cpp classifier/svm/ssl.h are Copyright 2006 Vikas Sindhwani (vikass@cs.uchicago.edu) SVM-lin: Fast SVM Solvers for Supervised and Semi-supervised Learning SVM-lin is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. SVM-lin is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with SVM-lin (see gpl.txt); if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL-2 -------- The files in the directory classifier/svm named GNPPSVM.h, GNPPSVM.cpp, GMNPSVM.h and GMNPSVM.cpp are Copyright (C) 1999-2008 Center for Machine Perception, CTU FEL Prague This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files in the directory shogun/classifier/svm/ named OnlineSVMSGD.cpp and OnlineSVMSGD.h Copyright (C) 2007 Leon Bottou This program is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version. On Debian systems, you can find the LGPL-2.1 license in: /usr/share/common-licenses/LGPL-2.1 -------- The files kernel/LocalAlignmentStringKernel.h and kernel/LocalAlignmentStringKernel.cpp are Copyright 2005 Jean-Philippe Vert, Hiroto Saigo This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files kernel/OligoKernel.h and kernel/OligoKernel.cpp are Copyright 2008 Christian Igel, Tobias Glasmachers This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The installation script src/.relpath.py is Copyright 2003, Cimarron Taylor and licensed under the MIT License. -------- The files src/shogun/lib/Hash.{cpp,h} are Copryright 2009 Soeren Sonnenburg Copyright 1993 Colin Plumb Copyright Austin Appleby and released under the GPL. The contained MD5 and Murmor hashing functions were integrated from public sources. Their respective copyrights follow: MD5 This code implements the MD5 message-digest algorithm. The algorithm is due to Ron Rivest. This code was written by Colin Plumb in 1993, no copyright is claimed. This code is in the public domain; do with it what you wish. Equivalent code is available from RSA Data Security, Inc. This code has been tested against that, and is equivalent, except that you don't need to include two pages of legalese with every copy. To compute the message digest of a chunk of bytes, declare an MD5Context structure, pass it to MD5Init, call MD5Update as needed on buffers full of bytes, and then call MD5Final, which will fill a supplied 16-byte array with the digest. MurmurHash2 (C) Austin Appleby, released under the MIT License Note - This code makes a few assumptions about how your machine behaves - 1. We can read a 4-byte value from any address without crashing 2. It will not produce the same results on little-endian and big-endian machines. -------- The files classifier/svm/DomainAdaptationSVM.{cpp,h} are Written (W) 2007-2009 Christian Widmer Copyright (C) 2007-2009 Max-Planck-Society and released under the GPL version 2 or any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL-2 -------- The files classifier/mkl/MKLMultiClass.{cpp,h} and classifier/mkl/MKLMultiClassGLPK.{cpp,h} are Written (W) 2009 Alexander Binder Copyright (C) 2009 Fraunhofer Institute FIRST and Max-Planck-Society and released under the GPL version 3 or any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files distance/BrayCurtisDistance.{cpp,h} distance/CanberraMetric.{cpp,h} distance/ChiSquareDistance.{cpp,h} distance/CosineDistance.{cpp,h} distance/GeodesicMetric.{cpp,h} distance/TanimotoDistance.{cpp,h} are Copyright (C) 2008-2009 Fraunhofer Institute FIRST and released under the GPL version 3 or later. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL ---------- The files lib/Compressor.{h,cpp} features/StringFileFeatures.h preproc/DecompressString.h are Copyright (C) 2009 Berlin Institute of Technology and released under the GPL version 3 or later. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL ---------- The files classifier/svm/LaRank.{cpp,h} are copyright are Copyright (C) 2008- Antoine Bordes Copyright (C) 2002 Leon Bottou, Yann Le Cun, AT&T Corp, NECI. Copyright (C) 1987-1999 Leon Bottou and Neuristique. Copyright (C) 1991-2001 AT&T Corp. This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111, USA On Debian systems, you can find the GPL-2 license in: /usr/share/common-licenses/GPL-2 ---------- The files lib/HDF5File.{h,cpp} lib/AsciiFile.{h,cpp} features/HashedWDFeaturesTransposed.{h,cpp} features/HashedWDFeatures.{h,cpp} features/SNPFeatures.{h,cpp} are Copyright (C) 2010 Berlin Institute of Technology and released under the GPL version 3 or later. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files kernel/MultitaskKernelMaskPairNormalizer.h are Written (W) 2010 Christian Widmer Copyright (C) 2010 Max-Planck-Society and released under the GPL version 2 or any later version. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL-2 -------- The files shogun/classifier/svm/libqp_splx.cpp and shogun/classifier/svm/libqp.h are Copyright (C) 2006-2008 Vojtech Franc, xfrancv@cmp.felk.cvut.cz and released under the GPL version 3 or later. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL -------- The files shogun/classifier/svm/SGDQN.{cpp,h} are Copyright (C) 2009- Antoine Bordes and released under the GPL version 2.1 or later. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL-2 -------- The files under shogun/classifier/vw, shogun/loss and the files shogun/lib/v_array.h, shogun/io/IOBuffer.{cpp,h} are Copyright (c) 2009 Yahoo! Inc. and licensed under the BSD (revised) open source license with extensions licensed under the GPL version 3 or later Copyright (c) The Regents of the University of California. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: 1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. 2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. 3. Neither the name of the University nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE REGENTS AND CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. On Debian systems, you can find the GPL license in: /usr/share/common-licenses/GPL