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Debian Changelog readseq (1-9)

2011

readseq (1-9) unstable; urgency=low

   * Remove [Biology] from description
   * Standards-Version: 3.9.2 (no changes needed)
   * debian/source/format: 3.0 (quilt)
   * debian/get-orig-source: Make sure repackaging is binary reproducible
   * Fixed Vcs fields
   * Debhelper 8 (control+compat)
   * debian/rules: switch to short dh syntax
   * debian/patches/gcc-4.6_format-security.patch: Fix format-security issue
     Closes: #643465
   * debian/dirs: Create dirs used by dh_auto_install

 -- Andreas Tille <tille@debian.org>  Fri, 28 Oct 2011 16:15:21 +0200

2009

readseq (1-8) unstable; urgency=low

   [ Charles Plessy ]
   * DM-Upload-Allowed: Yes
 
   [ Andreas Tille ]
   * Added Vcs-Browser, Vcs-Svn
   * Standards-Version: 3.8.3 (added README.source)
   * Debhelper 7
   * Switch to quilt
   * debian/patches/552830.patch: Patch from Ruben Molina <rmolina@udea.edu.co>
     to fix build problem (thanks to Ruben), changed one last remaining of
     getline myself
     Closes: #552830

 -- Andreas Tille <tille@debian.org>  Thu, 26 Nov 2009 12:31:49 +0100

2007

readseq (1-7) unstable; urgency=low

   * Group maintainance by Debian-Med packaging group
   * Build-Depends: debhelper (>= 5.0)
   * Standards-Version: 3.7.2 (no changes necessary)
   * Switched to dpatch, cdbs
   * Added get-orig-source target
   * Moved manpage to Debian directory
   * debian/control: Homepage tag

 -- Andreas Tille <tille@debian.org>  Sat, 17 Nov 2007 23:04:00 +0100

2004

readseq (1-6) unstable; urgency=low

   * Fixed amd64 bug (segfaults when command line options given), thanks to
     a hint by the ncbi6 maintainer. Closes: #269643.

 -- Michael Schmitz <schmitz@debian.org>  Tue, 26 Oct 2004 18:12:15 +0100

2003

readseq (1-5) unstable; urgency=low

   * Fixed bug in format detection that did result in readseq incorrectly
     claiming LinAll format files whose title begins with a number as
     Phylip format. Bug spotted locally and fixed by Gerhard Steger
     <steger@biophys.uni-duesseldorf.de>.

 -- Michael Schmitz <schmitz@debian.org>  Thu, 12 Jun 2003 17:55:15 +0100

2002

readseq (1-4) unstable; urgency=low

   * New Maintainer (took over from Andreas Tille 'cuz readseq is actually
     in use at our site).
 
   * Added LinAll and Vienna RNA formats.

 -- Michael Schmitz <schmitz@debian.org>  Thu, 07 Nov 2002 16:55:05 +0100

2001

readseq (1-3) unstable; urgency=low

   * Corrected spelling bug (Thanks to Matt Zimmerman <mdz@debian.org>)
     closes: #125305

 -- Andreas Tille <tille@debian.org>  Tue, 18 Dec 2001 12:03:25 +0100

readseq (1-2) unstable; urgency=low

   * compile explicitely with -lncbiid1 and -lnetcli according to a hint of
     ncbi-tools6 maintainer  Aaron M. Ucko <ucko@debian.org>
     (Thanks Aaron)
     closes: #119586

 -- Andreas Tille <tille@debian.org>  Thu, 15 Nov 2001 17:01:18 +0100

readseq (1-1) unstable; urgency=low

   * New Maintainer
     closes: #100257
   * New upstream release
   * Applied Bugfix  20Apr93
   * Applied fixes from former versions
   * Added debian/translate.patch to the sources for those brave people
     who want to test it (please report if I should apply it to the binary)
   * Replaced a gets call by fgets to avoid buffer overflow
   * increased  p.namewidth from 8 to 10 in ureadseq.h because Arb need this
   * Added patch by o. strunk (ARB) to allow numbers in genbank sequences
     to ureadseq.c
   * Added an undocumented ARB patch which seems to fix a problem with older
     Phylip versions.
   * Added a further patch from ARB.  Patches can be undone by just
     undefining ARB.
   * I did not apply the patch of the ARB version which wrapped isdigit by
     by rs_isdigit in readseq.c.
   * Declared in README.Debian that this is the packaged version 1 of
     readseq by certain reasons.  Because I really need this version I
     close the "new version available" bug.  If somebody really wants
     the new version please file an RFP bug against wnpp.  Make sure
     to read /usr/share/doc/readseq/README.Debian before.
     closes: #43372
   * Added URL to the package description because I consider this as
     "good style" to have an upstream link without installing the package.
   * Install Readseq.help as NCBI Vibrant Toolkit compatible helpfile
     instead of just putting it just into /usr/share/doc/readseq.

 -- Andreas Tille <tille@debian.org>  Mon, 5 Nov 2001 08:43:12 +0100

readseq (0.0-4) unstable; urgency=low

   * Maintainer set to Debian QA Group <packages@qa.debian.org>.

 -- Adrian Bunk <bunk@fs.tum.de>  Fri, 24 Aug 2001 23:51:22 +0200

readseq (0.0-3) unstable; urgency=low

   * Adopted by new maintainer; closes: #92801
   * Updated to latest standards version and added Build-Depends;
     closes: #84541, #91036, #91640
   * Corrected doc path in Makefile and manpage.
   * Moved from section misc to science.

 -- Dr. Guenter Bechly <gbechly@debian.org>  Thu, 19 Apr 2001 20:05:45 +0200

1999

readseq (0.0-2) unstable; urgency=low

   * Manual page. Closes #33772
   * Now linked with the NCBI libraries an therefore depends on
     ncbi-tools.

 -- Stephane Bortzmeyer <bortzmeyer@debian.org>  Sat, 6 Mar 1999 22:44:04 +0100

readseq (0.0-1) unstable; urgency=low

   * Initial Release.

 -- Stephane Bortzmeyer <bortzmeyer@debian.org>  Fri, 5 Feb 1999 16:58:28 +0100