2009
debian-med (1.3) unstable; urgency=low
* tasks/physics: Enhanced information about biosig
* tasks/*: Several changes and additional information for a
lot of prospective packages; a certain amount of packages
is now available as official packages
* debian/control.stub:
- Fixed Vcs-Svn (missing svn/)
* Replaced some remaining "cdd" strings in the docs by "blends"
* Standards-Version: 3.8.3 (no changes needed)
* config/control: Depends: blends-common (>= 0.6.6)
Closes: #542656
-- Andreas Tille <tille@debian.org> Fri, 21 Aug 2009 14:09:18 +0200
debian-med (1.2) unstable; urgency=low
[ Andreas Tille ]
* Bumped policy to 3.8.1 and make use of the new feature that
debian/control allows comment lines starting with # with no
preceding whitespace. [Policy paragraph 5.2]
* debhelper (>=7)
* Added med-statistics
* tasks/bio: Replaced biococoa.app by sequenceconverter.app
* tasks/bio-dev: Added libbiococoa-dev
* Build-Depends: blends-dev (0.6.3) to make sure no useless
metapackages with no dependency available in Debian will be
created
* tasks.ctl: Added missing tasks; tasks data, his, laboratory
which do not yet feature an existing depenency in Debian
were set to priority-none.
[ Michael Hanke ]
* Added ODIN to imaging task.
* Added VIA to the imaging task.
* Updated LIPSIA item to ppoint to the packaging VCS and note ITP.
-- Andreas Tille <tille@debian.org> Mon, 30 Mar 2009 07:56:56 +0200
debian-med (1.1) experimental; urgency=low
* Make use of blends-dev instead of cdd-dev
* Versioned build depends from blends-dev >= 0.6.1 because this
also supports dist experimental
* Adapted Vcs fields to new location (cdd -> blends)
* tasks/practice: Depends: aeskulap
* Added link to tasks page in long description of med-tasks
(thanks to James Busser <jbusser@interchange.ubc.ca> for the
hint)
* tasks/*: several updates of newly uploaded packages and
prospective packages
-- Andreas Tille <tille@debian.org> Tue, 06 Jan 2009 10:01:49 +0100
2008
debian-med (1.0) unstable; urgency=low
* tasks/bio-dev
- Added libgenome
- Added libmems as prospective package
- Moved bioconductor from bio to bio-dev
- Added prospective projects where Steffen Möller started some
packaging work
- libqsearch -> libqsearch-dev
* tasks/bio
- Added prospective projects where Steffen Möller started some
packaging work
- Suggests: texlive-latex-extra (because of TeXShade)
- Removed line breaks in Dependencies, because cdd-gen-control
is not compliant to RFC 822 and requires '\' at the end of
lines to continue parsing the tasks files. To simply circumvent
this problem the relevant lines were concatenated to not miss
the dependencies in the resulting control file
- Renamed dialign-t to dialign-tx
* tasks/tools
- Added mssstest
- Added wgerman-medical, hunspell-de-med (remark: these are not
really tools but we have no better section, typesetting might be
an option but does also fit not really good)
* tasks/imaging
- Added prospective packages from static page
* tasks/imaging-dev
- Removed libgtkimreg
- Added libvtk5
- Added prospective packages from static page
- libminc0-dev | libminc-dev -> libminc-dev
- insighttoolkit -> insighttoolkit3
* tasks/physics
- octave | octave2.1 -> octave3.0
* debian/control.stub: XS-DM-Upload-Allowed -> DM-Upload-Allowed
* Standards-Version: 3.8.0 (no changes needed)
* Fixed typing of Debian Med: sed -i 's/Debian-Med/Debian Med/' *
-- Andreas Tille <tille@debian.org> Mon, 30 Jun 2008 09:59:37 +0200
debian-med (0.17) unstable; urgency=low
* tasks/bio:
- Added emboss-kaptain as prospective package
- Added agdbnet as prospective package
- Added autodock, exonerate
- Suggests biococoa.app: Only suggests because status is
questionable
- Removed bugsx which is not really biology related
- Added gamgi as prospective package
- Moved unoffical and prospective packages from static
web pages to tasks file
* tasks/bio-dev:
- Added aceperl as prospective package
- Added libgff-perl as prospective package
- Added Recommends: libqsearch
* tasks/imaging
- Removed paul
- pngquant: Recommends -> Suggests
- Added gdmc as prospective package
- Added dicom4j as prospective package
* tasks/epi: New meta package: med-epi for epidemiology
research
* tasks/tools:
- Moved NetEpi prospective package to epi where it really
belongs to
- Added pondus
* Removed remark about recommended and suggested packages
from description or meta packages
* Build-Depends-Indep: cdd-dev (>= 0.5.0) which ensures that the
source tarball is builded properly and no network access is neede
to build the package
Closes: #470271
-- Andreas Tille <tille@debian.org> Wed, 20 Feb 2008 13:31:25 +0100
debian-med (0.16) unstable; urgency=low
* New upstream version
* Standards-Version: 3.7.3 (no changes needed)
* Added Vcs-Browser / Vcs-Svn tags
* tasks/imaging:
- Added Dr. Jekyll, libvista2 and dcm4che as prospective package
- Fixed minc and nifti library depends
- odin, gwyddion and many more as prospective package
- Removed libfslio1, libniftiio0 which are only available in Etch
- Suggests: Imview
* tasks/imaging-dev:
- libvista2-dev as prospective package
- Fixed minc-dev and nifti-dev library depends
- Removed libniftiio0-dev which is only available in Etch
* tasks/bio
- Added ballview and mustang as prospective packages
- dialign-t is now official package - removed long
description
- Added glam2 as prospective package
- textopo is now in texlilve-science, decreased this from Recommends
to Suggests to not spoil systems with whole texlive installation
* tasks/bio-dev: Added BioClipse as prospective package
Pkg-Description
* tasks/practice:
- Added Mirth as prospective package
- Fixed libchipcard depends
* Debian-Med packaging policy:
- Maintainer: Debian-Med Packaging Team
<debian-med-packaging@lists.alioth.debian.org>
- XS-DM-Upload-Allowed: yes
- Uploaders: Andreas Tille <tille@debian.org>
- Vcs-Browser, Vcs-Svn
* Increased mozilla-biofox from Suggests to Recommends. Installation of
firefox as Dependency of this package should be no real problem.
* Increased bugsx from Suggests to Recommends. It is automatically decreased
to Suggests by cdd-gen-control so there is no need to decrease it in the
tasks file.
* Make tasks files compliant with rfc822 to be able to use python-debian
tools successfully. That means basically to have exactly one
Depends/Recommends/Suggest per paragraph so the fix was to insert some
newlines and remove '\' in end of lines
* tasks/tools: Fixed description
* tasks/practice: tinyheb as prospective package
* Increased Build-Dep version cdd-dev (>= 0.4.7) because
0.4.5 and 0.4.6 are broken
* config/control: med-config Depends cdd-common (>= 0.4.7)
-- Andreas Tille <tille@debian.org> Tue, 19 Feb 2008 17:07:36 +0100
2007
debian-med (0.15) unstable; urgency=low
* med-imaging-dev: Added
Depends: libinsighttoolkit-dev
Suggests: insighttoolkit-examples
* med-imaging(-dev): Depend from libniftiio1(-dev) instead of
libniftiio0(-dev)
Closes: #448903
* Increased Build-Dep version cdd-dev (>= 0.4.4)
* Standards-Version: 3.7.3 (no changes needed)
* Added several prospective packages in tasks
-- Andreas Tille <tille@debian.org> Sun, 07 Oct 2007 18:25:56 +0200
debian-med (0.14) unstable; urgency=low
* Builded using new cdd-dev 0.4
- med-common is now renamed to med-config
- additional package med-tasks
* med-bio: added emboss
* med-imaging: amide, dicomnifti, imagej, python-nifti
decreased paul from Recommends to Suggests
* med-imaging-dev: cimg-dev
decreased libgtkimreg-dev from Recommends to Suggests
* med-practice: libchipcard3c1, libchipcard3d0
-- Andreas Tille <tille@debian.org> Sat, 11 Aug 2007 17:50:29 +0200
debian-med (0.13) unstable; urgency=low
* Removed entry for gnumed-client-debug because this package does
not exist any more. Removed gnumed-client menu as well because
this should be builded automatically from menu entry inside
gnumed-client package
Closes: #429217
* Added several packages to med-bio and reordering the task to
specific fields
* Imaging: Added dicomnifti
* Enhanced long description of med-common
* Remove header from po.stub/de.po because cdd-dev will add another
one
-- Andreas Tille <tille@debian.org> Thu, 28 Jun 2007 16:23:36 +0200
2006
debian-med (0.12) unstable; urgency=low
* Changed med-practice menu
Closes: #385584
Use menu entry for gnumed-client-debug that regards #389932.
Note: gnumed-client-debug is not in the med-practice dependency
list but it is suggested by gnumed-client. So if the package
is installed at the box then an additional menu item occures correctly
in the Debian-Med menu. If it is not installed, only gnumed-client
is shown in the menu.
* med-bio: Added alternative to tree-puzzle as tree-ppuzzle
* Drop med-dent because odontolinux was removed from Debian
* med-bio: Added poa
Moved vrom Suggests to Depends: seaview (now really free)
Suggests: wise-doc
* med-imaging: Depends: libfslio0, libniftiio0, nifti-bin
Suggests:
* med-imaging-dev: Depends: libfslio0-dev, libniftiio0-dev
Suggests: libnifti-doc
-- Andreas Tille <tille@debian.org> Thu, 14 Sep 2006 15:28:51 +0200
debian-med (0.11) unstable; urgency=low
* bugsx to from Depends to Suggets because this package moved to non-free
Closes: #383265
* Standards-Version: 3.7.2
Build-Depends: debhelper
* med-bio:
Depends: gromacs, dialign, kalign, probcons, wise, amap-align, biosquid
Suggests: mozilla-biofox
* debian/compat: 5
* Uploaders: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
-- Andreas Tille <tille@debian.org> Wed, 16 Aug 2006 10:07:41 +0200
2005
debian-med (0.10.1) unstable; urgency=low
* Make med-common depend from ${misc:Depends}
Closes: #331797
* Now med-practice really depends from gnumed-client which is now
awailable at Debian mirror
-- Andreas Tille <tille@debian.org> Wed, 5 Oct 2005 07:55:13 +0200
debian-med (0.10) unstable; urgency=low
* Rebuilded with cdd-dev 0.3.11 (and increased versioned dependency
because 0.3.10 created broken *.dsc file)
Closes: #328428
* Standards-Version: 3.6.2 (no changes necessary)
* Added dependencies:
med-bio: mipe, sim4, perlprimer
med-bio-dev: libbio-ruby
* Addes meta package: med-practice
-- Andreas Tille <tille@debian.org> Sun, 25 Sep 2005 21:14:47 +0200
2004
debian-med (0.9) unstable; urgency=low
* Removed gnutrion from tools because it was removed from Debian at all
* Rebuilded with cdd-dev 0.3.10 version
* med-bio:
Depends: muscle, gff2aplot, t-coffee, gff2ps, gdpc
Suggests: arb
* med-bio-dev
Recommends: libvibrant6-dev
Why: libmotif-dev conflicts lesstif-dev, so if someone wants to
install libmotif-dev it must be possible to deinstall
libvibrant6-dev without beeing forced to deinstall med-bio-dev
as well
Depends: python-biopython
* med-imaging:
paul now Recommends not Depends
Depends: dcmtk
Recommends: pngquant
* med-tools:
Depends: cycle
Suggests: cl-pubmed
Strong dependency would cost installing a large amount
of Common Lisp tools which in most cases is not worth
the effort
* Added user menu entries: bio/gff2aplot.txt, bio/gff2ps.txt,
bio/muscle.txt, bio/t-coffee.txt, bio/boxshade.txt,
bio-dev/python-biopython.txt, imaging/dcmtk.txt
* Added charset to debian/po.stub/de.po
-- Andreas Tille <tille@debian.org> Sun, 24 Oct 2004 20:59:03 +0200
debian-med (0.8.9) experimental; urgency=low
* New upstream version which now uses the features of cdd-dev 0.3.9 * Exclude .svn dirs in dist target of debian/rules
-- Andreas Tille <tille@debian.org> Fri, 16 Jul 2004 11:33:21 +0200
debian-med (0.8.3) unstable; urgency=high
* Rebuilded again against cdd-dev 0.3.4 which really closes the
mentioned bug.
* Urgency set to high because it really fixes a grave bug.
-- Andreas Tille <tille@debian.org> Thu, 15 Jul 2004 10:59:25 +0200
debian-med (0.8.2) unstable; urgency=high
* Rebuilded with cdd-dev 0.3.3 which closes a grave bug (which
was reassigned to cdd-dev and thus it is not closed in this
changelog).
* Please make sure that all ${HOME}/.menu/cdd-menu files or
${HOME}/.menu/med-* files are removed - they will not be
needed any more.
-- Andreas Tille <tille@debian.org> Wed, 14 Jul 2004 21:42:24 +0200
debian-med (0.8.1) unstable; urgency=low
* Adjust versioned dependency of med-common from cdd-common
Closes: #258373
-- Andreas Tille <tille@debian.org> Fri, 9 Jul 2004 09:18:49 +0200
debian-med (0.8) unstable; urgency=low
* Added med-physics, med-pharmacy, med-bio-dev * Overworked menus of meta packages
-- Andreas Tille <tille@debian.org> Fri, 4 Jun 2004 14:44:36 +0200
debian-med (0.7) unstable; urgency=low
* Switched to new version of cdd package (0.3) which has many
enhancements (no really important changes to the Debian-Med stuff
except that the packages have to be rebuilded with cdd-dev).
* New cdd-dev package cares for versioned dependency on med-common
Closes: #244903
-- Andreas Tille <tille@debian.org> Tue, 20 Apr 2004 11:21:16 +0200
debian-med (0.6) unstable; urgency=medium
* Took over Debian-Edu method to build metapackages from one
common source.
The changelogs of the previous single meta package sources
can be found in the source package under debian/oldchangelogs.
-- Andreas Tille <tille@debian.org> Mon, 22 Mar 2004 19:21:55 +0100