Package: dextractor (1.0-4)

[ Source: dextractor  ]

(d)extractor and compression command library

Dextractor commands allow one to pull exactly and only the information needed for assembly and reconstruction from the source HDF5 files produced by the PacBio RS II sequencer, or from the source BAM files produced by the PacBio Sequel sequencer.

For each of the three extracted file types -- fasta, quiva, and arrow -- the library contains commands to compress the given file type, and to decompress it, which is a reversible process delivering the original uncompressed file. The compressed .fasta files, with the extension .dexta, consume 1/4 byte per base. The compressed .quiva files, with the extension .dexqv, consume 1.5 bytes per base on average, and the compressed .arrow files, with the extension .dexar, consume 1/4 byte per base

For more information, please view the available documentation at https://github.com/thegenemyers/DEXTRACTOR

Other Packages Related to dextractor

• dep: libc6 (>= 2.17) [arm64, ppc64el]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.7) [not arm64, ppc64el]

• dep: libhdf5-103-1

  HDF5 C runtime files - serial version

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Architecture	Package Size	Installed Size	Files
amd64	47.8 kB	289.0 kB	[list of files]
arm64	42.1 kB	281.0 kB	[list of files]
armel	42.4 kB	276.0 kB	[list of files]
armhf	41.9 kB	212.0 kB	[list of files]
i386	46.2 kB	332.0 kB	[list of files]
mips64el	41.3 kB	290.0 kB	[list of files]
mipsel	45.1 kB	312.0 kB	[list of files]
ppc64el	51.6 kB	673.0 kB	[list of files]
s390x	46.1 kB	321.0 kB	[list of files]